Short answer: the right alternative depends on why you are leaving. If iDoklad feels expensive, Fakturoid or SuperFaktura give you payment matching for less. If Fakturoid gets expensive because you added people, iDoklad includes users in the price. If your bank is not supported, pick a tool that connects through open banking or forwarded bank e-mails. If your accountant uses Pohoda, mPOHODA is the natural move. And if the invoicing app was never the real problem, because you actually want to see business and personal money together, you need a different kind of tool.
Disclosure: I build MoneySky, which is one of the options below. It gets the same treatment as the others, weaknesses included.
Why people look for an alternative
iDoklad and Fakturoid are both good products. People rarely leave because invoicing is bad. They leave for one of five reasons:
The useful features sit on a pricier plan. Automatic payment matching starts at 231 Kč a month with Fakturoid (Na každý den) and 430 Kč a month with iDoklad (Oblíbený). The VAT return and kontrolní hlášení are Na maximum only at Fakturoid.
Your bank is not supported. Both match payments mainly through bank notification e-mails, and neither lists mBank. Revolut, Wise and N26 are not on their lists either.
You hired people. Fakturoid's paid plans include one user plus an accountant. Every extra person costs extra.
You need more than invoices. If you claim actual expenses, run an s.r.o. or your accountant wants data in a specific program, an invoicing app alone may not be enough.
Your money lives in several places. Invoicing apps stop at the invoice. They do not show your personal accounts, your second bank or how much you can actually spend after tax.
Which alternative fits which reason
| You are leaving because | Look at |
|---|---|
| iDoklad is too expensive for one person | Fakturoid, SuperFaktura |
| Fakturoid is too expensive for a team | iDoklad, mPOHODA Pro |
| Your bank is not supported (mBank, Revolut, Wise, N26) | MoneySky (open banking), mPOHODA (Everifin), SuperFaktura (forwarded bank e-mails) |
| Your accountant uses Pohoda | mPOHODA |
| You are a new business on a budget | Vyfakturuj (80% off the first year), Fakturoid (50%) |
| You want clients to pay invoices by card | Vyfakturuj Ideal, Fakturoid Na maximum |
| You want invoices, all bank accounts and tax planning together | MoneySky |
The alternatives one by one
Prices excluding VAT as listed on the providers' websites in November 2026. If you are not a VAT payer, you pay 21% on top and cannot claim it back.
Fakturoid (if you are leaving iDoklad)
The most polished Czech invoicing app and the cheapest way off iDoklad for one person. Na lehko costs 164 Kč a month (151 Kč on annual billing) and already includes the income tax return with the ČSSZ přehled. Payment matching starts at 231 Kč on Na každý den. The API is on every plan and there is a free MCP server, so it suits developers. Companies with an IČO younger than 12 months get 50% off the first annual invoice. The catch is users: each extra person is paid separately.
iDoklad (if you are leaving Fakturoid)
Users are included: 2 on Základní (187 Kč a month on annual billing), 5 on Oblíbený (358 Kč) and 9 on Prémiový (625 Kč). Oblíbený adds payment matching, the VAT return and kontrolní hlášení. It comes from Seyfor, the company behind Money S3, so it is the obvious pick when your accountant uses Money. The trial is 60 days with no card. There is no new-business discount.
SuperFaktura
One of the cheapest paid plans with payment matching among Czech invoicing apps: Základní at 129 Kč a month. The VAT return, kontrolní hlášení and souhrnné hlášení start on Standardní at 279 Kč. Matching works by forwarding your bank's notification e-mails, which can help with banks that other tools do not list, so test it with yours. Several users and the API only come with Prémiový at 469 Kč.
Vyfakturuj
Mini costs 175 Kč a month and includes payment matching. Ideal (299 Kč) adds a second user, recurring invoices and payment gateways such as GoPay, Stripe and PayPal, so clients can pay invoices by card. Profi covers three companies for 620 Kč. The standout is the discount: 80% off the first annual subscription if your IČO is younger than 24 months.
mPOHODA
Stormware's cloud invoicing. Start is free within limits (5 contacts, 100 issued invoices), Basic costs 199 Kč a month or 1,990 Kč a year, and Pro (358 Kč a month) gives five users and the API. Banks connect through Everifin, plus a direct Fio connection. If your accountant runs POHODA, this saves them the most work.
MoneySky
A different kind of tool. MoneySky combines invoicing with bank sync across all your accounts, business and personal, through PSD2 open banking. That includes banks invoicing apps usually skip, such as mBank, Revolut and Wise. Invoice payments are matched against the bank feed automatically. On the tax side it compares flat-rate expenses, actual expenses and paušální daň and prepares the income tax return, the insurance přehledy, the VAT return and kontrolní hlášení. Invoices download as ISDOC and Peppol UBL. The Freelance plan costs €4.99 a month or €49.90 a year (roughly 120 Kč a month), less than most invoicing apps charge for payment matching.
Weaknesses: no free plan (a 14-day trial instead), no quotes or prodejky, no team seats, no native mobile apps (it installs on your phone as a web app), no card payment link on invoices and no EET 2.0 support for in-person payments. It is also younger, with a smaller user base.
How to switch without making a mess
Switch at a clean break. The start of a month works, the start of a quarter or year is better. Your accountant gets one period from the old tool and the next one from the new tool, not a mix.
Keep your invoice numbering unique. Czech rules require each invoice number to be unique within its series. The simplest way is to start a new series in the new tool, for example with a different prefix, instead of trying to continue the old one.
Export before you cancel. Download contacts (usually CSV) and the PDF or ISDOC of every issued invoice. VAT payers must keep tax documents for 10 years, so do not rely on the old account staying open.
Move recurring invoices by hand. They rarely migrate. List them before you leave.
Reconnect payment matching. Turn off the old bank e-mail forwarding or API connection, connect the bank in the new tool and check the first few matches.
Tell your accountant and your clients. The accountant needs the new export. Clients only need to know if your bank account or invoice layout changes.
FAQ
Is there a free alternative to iDoklad?
Yes. Fakturoid, SuperFaktura, Vyfakturuj and mPOHODA all have free plans, typically capped at about five contacts or clients. They work for occasional invoicing. Payment matching and tax outputs need a paid plan everywhere.
What is the cheapest alternative to Fakturoid with payment matching?
Among classic invoicing apps, SuperFaktura Základní at 129 Kč a month excluding VAT, as of November 2026. Vyfakturuj Mini (175 Kč) is close, and with an IČO under 24 months its 80% first-year discount makes it cheaper still. MoneySky Freelance costs about 120 Kč a month (€4.99) and matches payments through open banking, but it has no free plan and fewer document types.
Can I move my old invoices from iDoklad to Fakturoid or vice versa?
Contacts move easily through CSV. Old invoices usually stay as an archive of PDFs or ISDOC files, and you continue in the new tool with a new number series. Ask the new provider's support before you switch, since import options change.
Which invoicing app works with Revolut or mBank?
Fakturoid and iDoklad do not list them for automatic matching. Tools that connect through PSD2 open banking, such as MoneySky, or through Everifin, such as mPOHODA, can work with a much wider range of banks. SuperFaktura matches through forwarded e-mails, so it depends on what your bank sends.
For a full side-by-side of every tool, read the honest comparison of invoicing software for Czech freelancers or the Fakturoid vs iDoklad head-to-head. If MoneySky sounds like the fit, you can try it free for 14 days, no card required.